Programas instalados en los servidores del CCG y de la LCG
| Nombre | Descripción corta |
|---|---|
| SWEMBL | A fast, memory-efficient peak-calling tool package for functional genomic and other data sets. |
| T-Coffee | Multiple Sequence Alignment Tools |
| TMHMM | Prediction of transmembrane helices in proteins |
| Tomcat de Apache | Contenedor de servlets de java |
| TopHat | TopHat is a fast splice junction mapper for RNA-Seq reads. |
| Tracer | Tracer is a program for analysing the trace files generated by Bayesian MCMC runs. |
| TransDecoder | Find Coding Regions Within Transcripts |
| Trimmomatic | A flexible read trimming tool for Illumina NGS data |
| Trinity | Trinity assembles transcript sequences from Illumina RNA-Seq data. |
| Trinotate | Trinotate: Transcriptome Functional Annotation and Analysis |
| tRNAscan-SE | Search for tRNA genes in genomic sequence. |
| UCSC Genome Browser (Command Line Utilities) | Command line utilities, also known as "kent" utilities, of the UCSC Genome Browser, including blat and liftOver. |
| USEARCH | Ultra-fast sequence analysis |
| VCFtools | VCFtools is a program package designed for working with VCF files. |
| Velvet | Sequence assembler for very short reads. |
