Programas instalados en los servidores del CCG y de la LCG
| Nombre | Descripción corta |
|---|---|
| Plink | Whole genome association analysis toolset. |
| PORTRAIT | Prediction of transcriptomic ncRNA by ab initio methods |
| PRANK | PRANK is a probabilistic multiple alignment program for DNA, codon and amino-acid sequences. |
| Prodigal | Prodigal: Prokaryotic Dynamic Programming Genefinding Algorithm. |
| ProtTest | High Performance Computing selection of models of protein evolution. |
| QUAST | QUAST: Quality Assessment Tool for Genome Assemblies |
| R | Lenguaje y ambiente de trabajo para cómputo estadístico y gráficos. |
| RasMol | visualizar estructuras de proteinas |
| RAxML | RAxML: Randomized Axelerated Maximum Likelihood |
| Reputer | Visualiza repeticiones en genomas completos o en cromosomas. |
| RNAmmer | The RNAmmer 1.2 method predicts 5s/8s, 16s/18s, and 23s/28s ribosomal RNA in full genome sequences. |
| rnaSPAdes | rnaSPAdes is an assembler for RNA-Seq data, which is based on SPAdes genome assembler. |
| Roary | Roary: the Pan Genome Pipeline |
| Rosetta | The Rosetta software suite includes algorithms for computational modeling and analysis of protein structures. |
| RSAT | Regulatory Sequence Analysis Tools |
