Programas instalados en los servidores del CCG y de la LCG
| Nombre | Descripción corta |
|---|---|
| BioPython | Biopython is a set of freely available tools for biological computation written in Python by an international team of developers. |
| BLAST | Comparación de secuencias de nucleótidos y proteínas. |
| BLAT | BLAT: BLAST-Like Alignment Tool |
| Bowtie | Bowtie is an ultrafast, memory-efficient short read aligner. |
| BWA | Burrows-Wheeler Aligner |
| CD-HIT | CD-HIT: Cluster Database at High Identity with Tolerance |
| Celera Assembler | Celera Assembler is a de novo whole-genome shotgun (WGS) DNA sequence assembler. |
| ChromHMM | ChromHMM: Chromatin state discovery and characterization |
| Circos | Circular visualization. Circos is a software package for visualizing data and information. |
| ClustalO | Clustal Omega: Latest version of Clustal - fast and scalable (can align hundreds of thousands of sequences in hours), greater accuracy due to new HMM alignment engine |
| ClustalW | ClustalW2 is a general purpose DNA or protein multiple sequence alignment program for three or more sequences. |
| Consed / Autofinish | Visualiza, edita y termina ensamble de secuencias. |
| Consensus / Wconsensus / Patser | Analiza y determina DNA. |
| CrossMap | CrossMap is a program for convenient conversion of genome coordinates (or annotation files) between different assemblies. |
| Cufflinks | Transcriptome assembly and differential expression analysis for RNA-Seq. |
